Package: influential
Type: Package
Title: Identification and Classification of the Most Influential Nodes
Language: en-US
Version: 2.3.1.9000
Authors@R: 
    c(
      person("Adrian", "Salavaty",
       role = c("aut", "cre"),
       email = "abbas.salavaty@gmail.com",
       comment = c(ORCID = "0000-0001-9320-5889")),
      person("Mirana", "Ramialison", role = "ths"),
      person(c("Peter", "D."), "Currie", role = "ths")
    )
Description: Provides functions for the identification, classification,
        and ranking of influential nodes and candidate features from
        network and omics data. The package implements the Integrated
        Value of Influence (IVI) for integrative network centrality
        analysis, the SIR-based Influence Ranking (SIRIR) model for
        unsupervised influence ranking, and the Experimental data-based
        Integrative Ranking (ExIR) model for prioritizing candidate
        driver, biomarker, and mediator features from experimental
        omics data. Functions are provided for network reconstruction
        from adjacency matrices and data frames, topological analysis,
        centrality calculation, assessment of associations between
        centrality measures, and conditional probability analysis. ExIR
        supports bulk and single-cell omics data, including matrices,
        sparse matrices, data frames, tibbles, and Seurat objects.
Imports: igraph, irlba, edgeR, cli, Matrix, SeuratObject, tibble,
        janitor, ranger, foreach, doParallel, ggplot2, Rcpp
LinkingTo: Rcpp
Suggests: Hmisc (>= 4.3-0), mgcv (>= 1.8-31), nortest (>= 1.0-4), NNS
        (>= 0.4.7.1), BiocManager, readr, shiny, shinythemes,
        shinyWidgets, shinyjs, shinycssloaders, colourpicker, magrittr,
        DT, knitr, rmarkdown
Depends: R (>= 4.0.0)
Additional_repositories: https://bioconductor.org/packages/release/bioc
URL: https://github.com/asalavaty/influential,
        https://asalavaty.github.io/influential/
BugReports: https://github.com/asalavaty/influential/issues
License: GPL-3
Encoding: UTF-8
LazyData: true
RoxygenNote: 7.3.3
VignetteBuilder: knitr
Config/pak/sysreqs: libglpk-dev libicu-dev libxml2-dev
Repository: https://asalavaty.r-universe.dev
Date/Publication: 2026-06-11 04:05:33 UTC
RemoteUrl: https://github.com/asalavaty/influential
RemoteRef: HEAD
RemoteSha: 5f4ef13a0c0d97ba7686caf054d728487bd2aad3
NeedsCompilation: yes
Packaged: 2026-06-11 05:31:25 UTC; root
Author: Adrian Salavaty [aut, cre] (ORCID:
    <https://orcid.org/0000-0001-9320-5889>),
  Mirana Ramialison [ths],
  Peter D. Currie [ths]
Maintainer: Adrian Salavaty <abbas.salavaty@gmail.com>